|
OEAV1130658
|
SARS-CoV-2/environment/BRA/FPOLIS-sewage-02/2020 ORF1ab polyprotein, RNA-dependent RNA polymerase region, (ORF1ab) gene |
MT925974 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Brazil |
2020-02-20 |
wastewater metagenome |
277 |
2021-03-29 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Fongaro,G., Stoco,P.H., Sobral,D., Grisard,E.C., Magri,M.E., Rogovski,P., Schorner,M., Barazzetti,F., Christoff,A.C., de Oliveira,L.F., Bazzo,M.L., Wagner,G., Hernandez,M. and Rodriguez-Lazaro,D. |
Microbiology, Imunology and Parasitology Departament, Federal University of Santa Catarina |
|
277 |
100.00 |
|
OEAV1130659
|
SARS-CoV-2/environment/BRA/FPOLIS-sewage-02/2020 surface glycoprotein (S) gene |
MT925978 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Brazil |
2020-02-20 |
wastewater metagenome |
107 |
2021-03-29 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Fongaro,G., Stoco,P.H., Sobral,D., Grisard,E.C., Magri,M.E., Rogovski,P., Schorner,M., Barazzetti,F., Christoff,A.C., de Oliveira,L.F., Bazzo,M.L., Wagner,G., Hernandez,M. and Rodriguez-Lazaro,D. |
Microbiology, Imunology and Parasitology Departament, Federal University of Santa Catarina |
|
107 |
100.00 |
|
OEAV1130660
|
SARS-CoV-2/environment/BRA/FPOLIS-sewage-03/2020 ORF1ab polyprotein, RNA-dependent RNA polymerase region, (ORF1ab) gene |
MT925975 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Brazil |
2020-03-04 |
wastewater metagenome |
277 |
2021-03-29 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Fongaro,G., Stoco,P.H., Sobral,D., Grisard,E.C., Magri,M.E., Rogovski,P., Schorner,M., Barazzetti,F., Christoff,A.C., de Oliveira,L.F., Bazzo,M.L., Wagner,G., Hernandez,M. and Rodriguez-Lazaro,D. |
Microbiology, Imunology and Parasitology Departament, Federal University of Santa Catarina |
|
277 |
100.00 |
|
OEAV1130661
|
SARS-CoV-2/environment/BRA/FPOLIS-sewage-03/2020 surface glycoprotein (S) gene |
MT925979 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Brazil |
2020-03-04 |
wastewater metagenome |
107 |
2021-03-29 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Fongaro,G., Stoco,P.H., Sobral,D., Grisard,E.C., Magri,M.E., Rogovski,P., Schorner,M., Barazzetti,F., Christoff,A.C., de Oliveira,L.F., Bazzo,M.L., Wagner,G., Hernandez,M. and Rodriguez-Lazaro,D. |
Microbiology, Imunology and Parasitology Departament, Federal University of Santa Catarina |
|
107 |
100.00 |
|
OEAV1130662
|
SARS-CoV-2/environment/BRA/FPOLIS-sewage-11/2019 ORF1ab polyprotein, RNA-dependent RNA polymerase region, (ORF1ab) gene |
MT925972 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Brazil |
2019-11-27 |
wastewater metagenome |
277 |
2021-03-29 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Fongaro,G., Stoco,P.H., Sobral,D., Grisard,E.C., Magri,M.E., Rogovski,P., Schorner,M., Barazzetti,F., Christoff,A.C., de Oliveira,L.F., Bazzo,M.L., Wagner,G., Hernandez,M. and Rodriguez-Lazaro,D. |
Microbiology, Imunology and Parasitology Departament, Federal University of Santa Catarina |
|
277 |
100.00 |
|
OEAV1130663
|
SARS-CoV-2/environment/BRA/FPOLIS-sewage-11/2019 surface glycoprotein (S) gene |
MT925976 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Brazil |
2019-11-27 |
wastewater metagenome |
107 |
2021-03-29 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Fongaro,G., Stoco,P.H., Sobral,D., Grisard,E.C., Magri,M.E., Rogovski,P., Schorner,M., Barazzetti,F., Christoff,A.C., de Oliveira,L.F., Bazzo,M.L., Wagner,G., Hernandez,M. and Rodriguez-Lazaro,D. |
Microbiology, Imunology and Parasitology Departament, Federal University of Santa Catarina |
|
107 |
100.00 |
|
OEAV1130664
|
SARS-CoV-2/environment/BRA/FPOLIS-sewage-12/2019 ORF1ab polyprotein, RNA-dependent RNA polymerase region, (ORF1ab) gene |
MT925973 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Brazil |
2019-12-11 |
wastewater metagenome |
277 |
2021-03-29 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Fongaro,G., Stoco,P.H., Sobral,D., Grisard,E.C., Magri,M.E., Rogovski,P., Schorner,M., Barazzetti,F., Christoff,A.C., de Oliveira,L.F., Bazzo,M.L., Wagner,G., Hernandez,M. and Rodriguez-Lazaro,D. |
Microbiology, Imunology and Parasitology Departament, Federal University of Santa Catarina |
|
277 |
100.00 |
|
OEAV1130665
|
SARS-CoV-2/environment/BRA/FPOLIS-sewage-12/2019 surface glycoprotein (S) gene |
MT925977 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Brazil |
2019-12-11 |
wastewater metagenome |
107 |
2021-03-29 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Fongaro,G., Stoco,P.H., Sobral,D., Grisard,E.C., Magri,M.E., Rogovski,P., Schorner,M., Barazzetti,F., Christoff,A.C., de Oliveira,L.F., Bazzo,M.L., Wagner,G., Hernandez,M. and Rodriguez-Lazaro,D. |
Microbiology, Imunology and Parasitology Departament, Federal University of Santa Catarina |
|
107 |
100.00 |
|
OEAV3786807
|
SARS-CoV-2/Wastewater/HRV/PV53-PV55-PV57-PV64/2021 ORF1ab polyprotein, 3'-to-5' exonuclease region, (ORF1ab) gene |
OK085824 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Croatia |
2021-01-02 |
wastewater metagenome |
330 |
2021-09-10 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Brnic,D., Lojkic,I. and Jemersic,L. |
Veterinary Public Health, Croatian Veterinary Institute |
|
330 |
100.00 |
|
OEAV6117008
|
SARS-CoV-2/Wastewater sample/CHE/Bellinzona_2020_02_27_A/2020 surface glycoprotein (S) gene |
OM501598 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Switzerland |
2020-02-27 |
Wastewater sample |
293 |
2022-02-04 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Cariti,F. |
LCE, EPFL LCE, EPFL ENAC IIE LCE GR A1 CM 1 119 (Centre Midi) Station 2 CH - 1015 Lausanne, Lausanne, Lausanne 1015, Switzerland |
|
293 |
100.00 |
|
OEAV6117009
|
SARS-CoV-2/Wastewater sample/CHE/Bellinzona_2020_03_05_B/2020 surface glycoprotein (S) gene |
OM501599 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Switzerland |
2020-03-05 |
Wastewater sample |
290 |
2022-02-04 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Cariti,F. |
LCE, EPFL LCE, EPFL ENAC IIE LCE GR A1 CM 1 119 (Centre Midi) Station 2 CH - 1015 Lausanne, Lausanne, Lausanne 1015, Switzerland |
|
290 |
100.00 |
|
OEAV6117010
|
SARS-CoV-2/Wastewater sample/CHE/Biasca_2020_03_01_B/2020 surface glycoprotein (S) gene |
OM501600 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Switzerland |
2020-03-01 |
Wastewater sample |
301 |
2022-02-04 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Cariti,F. |
LCE, EPFL LCE, EPFL ENAC IIE LCE GR A1 CM 1 119 (Centre Midi) Station 2 CH - 1015 Lausanne, Lausanne, Lausanne 1015, Switzerland |
|
300 |
99.67 |
|
OEAV6117011
|
SARS-CoV-2/Wastewater sample/CHE/Biasca_2020_03_08_A/2020 surface glycoprotein (S) gene |
OM501601 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Switzerland |
2020-03-08 |
Wastewater sample |
270 |
2022-02-04 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Cariti,F. |
LCE, EPFL LCE, EPFL ENAC IIE LCE GR A1 CM 1 119 (Centre Midi) Station 2 CH - 1015 Lausanne, Lausanne, Lausanne 1015, Switzerland |
|
268 |
99.26 |
|
OEAV6117012
|
SARS-CoV-2/Wastewater sample/CHE/Chiasso_2020_02_29_B/2020 surface glycoprotein (S) gene |
OM501592 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Switzerland |
2020-02-29 |
Wastewater sample |
310 |
2022-02-04 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Cariti,F. |
LCE, EPFL LCE, EPFL ENAC IIE LCE GR A1 CM 1 119 (Centre Midi) Station 2 CH - 1015 Lausanne, Lausanne, Lausanne 1015, Switzerland |
|
310 |
100.00 |
|
OEAV6117013
|
SARS-CoV-2/Wastewater sample/CHE/Locarno_2020_03_01_B/2020 surface glycoprotein (S) gene |
OM501602 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Switzerland |
2020-03-01 |
Wastewater sample |
326 |
2022-02-04 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Cariti,F. |
LCE, EPFL LCE, EPFL ENAC IIE LCE GR A1 CM 1 119 (Centre Midi) Station 2 CH - 1015 Lausanne, Lausanne, Lausanne 1015, Switzerland |
|
326 |
100.00 |
|
OEAV6117014
|
SARS-CoV-2/Wastewater sample/CHE/Mendrisio_2020_02_28_B/2020 surface glycoprotein (S) gene |
OM501593 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Switzerland |
2020-02-28 |
Wastewater sample |
316 |
2022-02-04 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Cariti,F. |
LCE, EPFL LCE, EPFL ENAC IIE LCE GR A1 CM 1 119 (Centre Midi) Station 2 CH - 1015 Lausanne, Lausanne, Lausanne 1015, Switzerland |
|
314 |
99.37 |
|
OEAV6117015
|
SARS-CoV-2/Wastewater sample/CHE/Mendrisio_2020_02_29_A/2020 surface glycoprotein (S) gene |
OM501594 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Switzerland |
2020-02-29 |
Wastewater sample |
326 |
2022-02-04 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Cariti,F. |
LCE, EPFL LCE, EPFL ENAC IIE LCE GR A1 CM 1 119 (Centre Midi) Station 2 CH - 1015 Lausanne, Lausanne, Lausanne 1015, Switzerland |
|
326 |
100.00 |
|
OEAV6117016
|
SARS-CoV-2/Wastewater sample/CHE/Mendrisio_2020_03_02_B/2020 surface glycoprotein (S) gene |
OM501595 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Switzerland |
2020-03-02 |
Wastewater sample |
326 |
2022-02-04 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Cariti,F. |
LCE, EPFL LCE, EPFL ENAC IIE LCE GR A1 CM 1 119 (Centre Midi) Station 2 CH - 1015 Lausanne, Lausanne, Lausanne 1015, Switzerland |
|
326 |
100.00 |
|
OEAV6117017
|
SARS-CoV-2/Wastewater sample/CHE/Scairolo_2020_02_27_B/2020 surface glycoprotein (S) gene |
OM501596 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Switzerland |
2020-02-27 |
Wastewater sample |
247 |
2022-02-04 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Cariti,F. |
LCE, EPFL LCE, EPFL ENAC IIE LCE GR A1 CM 1 119 (Centre Midi) Station 2 CH - 1015 Lausanne, Lausanne, Lausanne 1015, Switzerland |
|
244 |
98.79 |
|
OEAV6117018
|
SARS-CoV-2/Wastewater sample/CHE/Scairolo_2020_02_28_B/2020 surface glycoprotein (S) gene |
OM501597 |
RNA viruses |
Severe acute respiratory syndrome coronavirus 2 |
Switzerland |
2020-02-28 |
Wastewater sample |
238 |
2022-02-04 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
NCBI Virus/Genbank |
|
|
Cariti,F. |
LCE, EPFL LCE, EPFL ENAC IIE LCE GR A1 CM 1 119 (Centre Midi) Station 2 CH - 1015 Lausanne, Lausanne, Lausanne 1015, Switzerland |
|
235 |
98.74 |